Recent gut-microbiome paper: Metagenomics... - Cure Parkinson's

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Recent gut-microbiome paper: Metagenomics of Parkinson’s disease implicates the gut microbiome in multiple disease mechanisms (Nov 2022)

jeffreyn profile image
12 Replies

"We validate, in human PD, findings that were observed in experimental models; reconcile and resolve human PD microbiome literature; and provide a broad foundation with a wealth of concrete testable hypotheses to discern the role of the gut microbiome in PD."

My money is still on curli.

nature.com/articles/s41467-...

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jeffreyn profile image
jeffreyn
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docjleonard55 profile image
docjleonard55

Can't say that I understood it all, but I did get one thing out of it. In PD the microbiome is generally increased in inflammatory species, and diminished in species that produce SCFAs. Now if we could design a probiotic that effects both of those...

johntPM profile image
johntPM

"In another genetic model of PD (Pink1-/-), intestinal infection with Gram-negative bacterial pathogens was shown to elicit an immune reaction that leads to neuronal degeneration and motor deficits, and which can be reversed with the PD-medication, L-dopa1 ... In addition, we and others have found that, curli, an amyloidogenic protein produced by Gram-negative Escherichia coli, induces alpha-synuclein aggregation and accelerates disease in the gut and neurodegeneration in the brain"

Perhaps someone could help make this clearer for me. Does it mean that motor deficits having been caused by a particular immune reaction can be reversed by levodopa? Or, more excitingly, does it mean that levodopa can be a factor that leads to less neuronal degeneration?

jeffreyn profile image
jeffreyn in reply to johntPM

I think that the first sentence you quoted is based on the following sentence, which comes from the abstract of reference 13:

"Notably, these mice show a sharp decrease in the density of dopaminergic axonal varicosities in the striatum and are affected by motor impairment that is reversed after treatment with L-DOPA."

So I think it's the former, rather than the (more exciting) latter.

macmiddle profile image
macmiddle in reply to jeffreyn

But interestingly only about 5% of the Levodopa medication one takes gets through the blood-brain barrier...see article in Harvard gazette on this. news.harvard.edu/gazette/st...

So the changing the gut may be the answer - so that more medication can actually be absorbed and put to work...

jeffreyn profile image
jeffreyn in reply to macmiddle

See also a 2019 SoPD blog post from Simon Stott.

"In today’s post we are going to look at a recent piece of research that suggests some of the bacteria in our gut can influence the availability of the medication we use to treat Parkinson’s."

"In addition, we will look at a novel way researchers are re-engineering bacteria in the gut to correct other medical conditions (such as phenylketonuria) and we will ask if the same can not be applied to Parkinson’s."

scienceofparkinsons.com/201...

Smittybear7 profile image
Smittybear7 in reply to johntPM

What test can you have done to measure the bacteria in your gut? Who would order that test for you? I've asked my PCP to order a stool analysis and he won't do it. Any advice thank you

Boscoejean profile image
Boscoejean in reply to Smittybear7

The American Gut Project

This analogy applies to our inner gut ecosystems as well. I reached out to Daniel McDonald, PhD, Scientific Director of the American Gut Project at the University of California San Diego’s (UC San Diego) School of Medicine, to understand more about where the research stands on defining what is considered healthy in terms of a gut microbiota.

American Gut is a crowd-sourced non-profit research project in which17,000 people – and counting – have paid a small fee to submit a stool sample to the Knight Lab at UC San Diego for analysis. Using gene sequencing technology of the stool sample, researchers can identify the types of bacterial and archaeal organisms residing in a participant’s gut microbiota and correlate the results to self-reported data on the participant’s diet and other lifestyle factors.

fodmapeveryday.com/5-reason....

Boscoejean profile image
Boscoejean in reply to Smittybear7

upon further research on the American Gut project I find that it has been temporarily been shut down because of research being re-directed to covid.

Important Update - Project temporarily closed.

We are currently not able to supply any of our regular collection kits.

The Microsetta Initiative and its subsidiaries, including the American & British Gut Projects, have pivoted to COVID-19 research. We are working as hard as we can, but please be patient as these changes have required a complete overhaul of our infrastructure.

jeffreyn profile image
jeffreyn in reply to Smittybear7

The BioCollective website should be worth a look.

thebiocollective.com/

jeffmayer profile image
jeffmayer

What on earth does that mean can someone please translate

jeffreyn profile image
jeffreyn in reply to jeffmayer

Maybe start with the comment by code4science on the Reddit website.

reddit.com/r/Microbiome/com...

jeffmayer profile image
jeffmayer in reply to jeffreyn

Lthanks

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